MyTardis deployments


Store.Monash, Monash University’s deployment of MyTardis, is currently being used to manage research data from multiple facilities including Monash Micro Imaging, FlowCore, The Clive and Vera Ramaciotti Centre for Structural Cryo-Electron Microscopy and X-ray Microscopy Facility for Imaging Geo-materials (XMFIG). MyTardis is also being used by the Monash Biomedical Proteomics Facility and Medical Genomics Facility. Monash University has developed a prototype instrument integration service that ingests data from 21+ instruments into MyTardis and enables access to this data from High Performance Computing facilities like MASSIVE and cloud-based analysis environments like the Characterisation Virtual Laboratory.


Store.Synchrotron is the Australian Synchrotron’s deployment of MyTardis which automatically receives and archives raw diffraction data, related metadata and preliminary results of automated data-processing workflows for the Macromolecular Crystallography beamlines.


ImageTrove is a deployment of MyTardis with additional components for use in preclinical and clinical imaging within the National Imaging Facility. The major additions are a DICOM server/client and AAF integration, some of these features are now available as plugins within MyTardis. So far there are deployments of ImageTrove at three NIF sites and one at an AMMRF site. Auto-ingest client tools are also supplied that understand metadata from most pre-clinical imaging systems (Bruker, Siemens, MicroPET and DICOM). All data within an ImageTrove instance is organised via Project ID's that are auto-harvested from information entered on scanners and included in the metadata.